Graphical user interface for Genomic Sequence Comparison
MycoHit is a JAVA application
This program serves to perform BLAST searches > then parses the TBLASTN result files with PERL scripts > in order to select the highest score for each protein. Obtained data, including the score, are then stored on a local MYSQL database.
It was first published in this article: Veyrier F, Pletzer D, Turenne C, Behr MA. Phylogenetic detection of horizontal gene transfer during the step-wise genesis of Mycobacterium tuberculosis. BMC Evol Biol. 2009 Aug 10;9:196. doi: 10.1186/1471-2148-9-196.
Please contact Lynn Dery Capes at lynn.derycapes [at] mail.mcgill.ca if you wish to receive a zipped copy of the files and instructions for this application.
