McGill.CA / Integrated Quantitative Biology Initiative / Research Output

Presentations

Equipment highlighted in each presentation (talk, seminar, or poster) is
listed at the end of each description.

 

2020

  1. Rodrigo Reyes. Subunit dynamics in the eukaryotic replisome in live cells. 2nd DNA and Proteins as single-molecules in vivo and in vitro Fusion Conference (Bahamas) [Lightsheet 2]

  2. Rodrigo Reyes. Tracking single-molecules in live budding yeast. Lake Tahoe Cell Size meeting. (Lake Tahoe, USA) [Lightsheet 2]

  3. Huan Zheng: Understanding the cell-size regulation of transcription in live-yeast using single-molecule techniques. 2nd DNA and Proteins as single-molecules in vivo and in vitro Fusion Conference (Bahamas). [Lightsheet 2]

  4. Viridiana Lopez: Studying DnaA function in vivo at a single-molecule level. 2nd DNA and Proteins as single-molecules in vivo and in vitro Fusion Conference (Bahamas). [Lightsheet 2]

  5. Rodrigo Reyes.Tracking single-molecules in live budding yeast. Lake Tahoe Cell Size meeting. Lake Tahoe, USA

  6.  

2019

  1. Rodrigo Reyes. Eukaryotic replisome dynamics in live cells. 4th Canadian Symposium on Telomeres and Genome Integrity. Mount Gabriel, Qc, Canada. [Lightsheet 2]
  2. Rodrigo Reyes. Replisome dynamics in live bacteria and budding yeast. Gordon Research Conference on Single Molecule Approaches to Biology. West Dover, USA. [Lightsheet 2]
  3. Rodrigo Reyes. Understanding the cell size regulation of transcription in live-cells. Gordon Research Conference on Single Molecule Approaches to Biology. West Dover, USA. [Lightsheet 2]
  4. Baljyot Parmar, Stephanie Weber. Modeling polymer behaviour using full field molecular dynamic simulations. Gordon Research Conference: Fluctuations, Landscapes and Statistical Mechanics of Biological Heterogeneity. Ventura, CA, USA. [Workstation 1]
  5. Rodrigo Reyes. DNA and Proteins as single-molecules in vivo and in vitro. Fusion Conference: DNA and Interacting Proteins as Single Molecules - In Vitro and In Vivo Conference. Cancun, Mexico. [Lightsheet 2]
  6. Rodrigo Reyes. Replisome dynamics in live bacteria and budding yeast. 4th Canadian Symposium on Telomeres and Genome Integrity. Mount Gabriel, Qc, Canada. [Lightsheet 2]
  7. Rodrigo Reyes: Single molecule studies of the yeast genome. Bellairs Workshop on the physical basis of cellular memory and adaptation (Barbados) {Lightsheet 2]
  8. Rodrigo Reyes: Subunit dynamics in the eukaryotic replisome in live cells,  June 2019 Speaker at the Canadian Society for Molecular Biosciences 62nd Annual Conference, Montreal {Lightsheet 2]
  9. Ziad W. El-Hajj, Pim Pim van den Bersselaar, Rodrigo Reyes-Lamothe: Origin of replication dynamics and nuclear movement in Saccharomyces cerevisiae. Meeting "Eukaryotic DNA replication & genome maintenance”. Cold Spring Harbor Laboratory. [Lightsheet 2]
  10. Nitin Kapadia, Ziad El-Hajj, Rodrigo Reyes-Lamothe: Single-molecule studies of eukaryotic replisome dynamics. Meeting "Eukaryotic DNA replication & genome maintenance”. Cold Spring Harbor Laboratory.[Lightsheet 2]
  11. Nitin Kapadia, Ziad El-Hajj, Angela Yu, Thomas Beattie, Rodrigo Reyes-Lamothe: Subunit dynamics in the eukaryotic replisome in live cells. Meeting "Eukaryotic DNA replication & genome maintenance”. Cold Spring Harbor Laboratory. [Lightsheet 2]

2018

  1. Hoac B, Boukpessi T, Buss DJ, Chaussain C, Murshed M, McKee MD. Ablation of osteopontin in osteomalacic Hyp mice partially rescues the deficient mineralization without correcting hypophosphatemia. Annual Mtg. Amer. Soc. Bone Mineral Res. Montreal, QC, Canada. [Xradia]
  2. Hoac B, Boukpessi T, Buss DJ, Chaussain C, Murshed M, McKee MD. Ablation of osteopontin in osteomalacic Hyp mice partially rescues the deficient mineralization without correcting hypophosphatemia. Annual Mtg. Amer. Soc. Bone Mineral Res. Montreal, QC, Canada. [Xradia]
  3. Justin Di Trani ,Anthony Mittermaier. Measuring Enzyme Kinetics Using Isothermal Titration Calorimetry. Symposium annuel PROTEO. Quebec City, QC, Canada. [FPLC, ITC200]
  4. Yun Wang, Justin Di Trani, Jinming Guan, Karine Auclair, Anthony K. Mittermaier. Inhibition and activation mechanism study of the kinase by isothermal titration calorimetry (ITC). Symposium annuel PROTEO. Quebec City, QC, Canada. [FPLC, ITC200]
  5. Yun Wang, Justin Di Trani, Jinming Guan, Karine Auclair, Anthony K. Mittermaier. Biophysical studies of the kinase kinetic by Isothermal titration calorimetry (ITC). BioConnect. Montreal, QC, Canada. [FPLC, ITC200]
  6. Scott DD, Trahan C, Zindy PJ, Delubac M, Aguilar LC, Adivarahan S, Wei KE, Zenklusen D and Oeffinger M. Nol12 is a novel RBP at the nexus of RNA and DNA metabolism. 10th CNPN Meeting. Vancouver, BC, Canada, IRCM.
  7. Thomas McAlear. The spindle protein CKAP2 is a potent microtubule growth factor. EMBO Microtubule meeting: From Atoms to Complex Systems. Heidelberg, Germany. [TIRF_GB1 and 2]
  8. Sami Chaaban. The Relationship between Microtubule Birth & Death. "European Molecular Biology Organization Symposium; Microtubule: Structure, Regulation, and Functions.” Heidelberg, Germany. [TIRF_GB1 and 2]
  9. Thomas McAlear. CKAP2 is a potent microtubule assembly factor. American Society for Cell Biology. San Diego, USA. [TIRF_GB1 and 2]
  10. Siobhan Schenk. TPPP is a Golgi outpost protein that nucleates microtubules. American Society for Cell Biology. San Diego, USA. [TIRF_GB1 and 2]
  11. Sami Chaaban. Conserved and divergent aspects of microtubule structure and dynamic instability. American Society for Cell Biology Annual Meeting. San Diego, CA, USA. [TIRF_GB1 and 2]
  12. Laurentiu Oprea. Modeling Traveling Wave Dynamics in the Visual Cortex. Annual Meeting of Computational Neuroscience (CNS). Seattle, USA. [Workstation]
  13. Portalier, S.*, M. Cherif, G.F. Fussmann & M. Loreau. Food webs: Physics and body size matter. Ecological Society of America. Fort Lauderdale, FL, USA. [Workstation]
  14. François-Xavier Masson, Georges Beaudoin, Denis Laurendeau, Victor de Bronac de Vazelhes and Nicolas Boulianne-Verschelden. Gold grains morphology using X-ray 3D microtomography - Application to constrain distance of transport in glacial sediments. Resources for Future Generations (RFG) conference. Vancouver, BC. Canada. [Xradia]
  15. Bourque RD, Larsson HCE. Endocast reconstructions and comparisons between Cricosaurus sp. and Stolokrosuchus lapparenti. Society of Vertebrate Paleontology 78th Annual Meeting. Albuquerque, USA. [Xradia]
  16. Widrig K, Larsson HCE . Bite force and cranial kinesis in Tyrannosaurus rex. Society of Vertebrate Paleontology 78th Annual Meeting. Society of Vertebrate Paleontology 78th Annual Meeting. Albuquerque, USA. [Xradia]
  17. Bourque RD, Larsson HCE. Endocast reconstructions and comparisons between Cricosaurus sp. and Stolokrosuchus lapparenti. Canadian Society of Vertebrate Palaeontology 6th Annual Conference. Ottawa, ON, Canada. [Xradia]
  18. Jimmy Hsu. Numerical parameter compression on biological models. Gordon research conference. [Workstation]
  19. Jimmy Hsu. Numerical parameter compression on biological models. 3rd Annual Meeting of the Biophysical Society of Canada . Montreal, QC, Canada. [Workstation]
  20. Jimmy Hsu. Numerical parameter compression on biological models. 62nd Annual Meeting Biophysical Society San Francisco, CA, USA.
  21. Dececchi TA, Habib M, Larsson HCE. Flights of fancy: modeling powered flight verses gliding in the bizarre theropod Yi qi and its bearing on the question of the origins of flight across Pennaraptora. Society of Vertebrate Paleontology 78th Annual Meeting. Albuquerque, USA. [Xradia]
  22. Pittman MD, Pei R, Goloboff PA, Dececchi TA, Habib MB, Kaye TG, Larsson HCE, Norell MA, Brusatte SL, Xu X. Multiple origins of powered flight among paravian theropod dinosaurs: constraints from new phylogenetic, aerodynamic and anatomical data. 5th International Palaeontological Congress. Paris, France, [Xradia]
  23. Pittman M, Pei R, Goloboff P, Dececchi TA, Habib M, Kaye T, Larsson HCE, Norell M, Brusatte S, Xu X. Gradual build-up of powered flight potential among close avian relatives revealed by combining phylogenetic, aerodynamic, and anatomical data. Society of Vertebrate Paleontology 78th Annual Meeting. Albuquerque, USA. [Xradia]
  24. Dececchi A, Habib M, Larsson HCE (2018). Once, twice, three times…maybe?: investigating the origins of flight potential within maniraptoran theropods. International Pennaraptoran Dinosaur Symposium. Hong Kong, China. [Xradia]
  25. Widrig K, Larsson HCE. Bite force and cranial kinesis in Tyrannosaurus rex. Society of Vertebrate Paleontology 78th Annual Meeting. Canadian Society of Vertebrate Palaeontology 5th Annual Meeting. Dinosaur Provincial Park, Alberta, Canada. [Xradia]
  26. Anthony Mittermaier. A suite of isothermal titration calorimetry methods for measuring the strength, mode, and kinetics of enzyme inhibition. Canadian Chemistry Conference and Exhibition. Edmonton, AB, Canada. [FPLC, ITC200]
  27. Anthony Mittermaier. Interplay between charge and conformational sampling in the disordered carboxy terminus of yeast gamma tubulin. International conference on magnetic resonance in biological systems. Dublin, Ireland. [FPLC, ITC200]
  28. Gonzalo Cosa. Chemicontrolled activation of BODIPY based fluorescent probes. Toward Spatial Location of Single Chemical Events within Cells. XXVII IUPAC Symposium in Photochemistry. Dublin, Ireland. [HPLC]
  29. Gonzalo Cosa. Chemicontrolled activation of BODIPY based fluorescent probes. Toward Spatial Location of Single Chemical Events within Cells. ProbeFest 2018, Janelia Research Campus . Janelia, USA. [HPLC]
  30. Gonzalo Cosa. Chemicontrolled activation of BODIPY based fluorescent probes. Toward Spatial Location of Single Chemical Events within Cells. Photo4Future’ Symposium on Photochemistry. Eindhoven, Netherlands. [HPLC]
  31. Trahan C, Pechmann S, Scott DD, Aguilar LC, Zenklusen D, and Oeffinger M. Proteomic Investigation of variances along gene expression pathways. Advances in Biomedical Research Seminar Series. U Ottawa, Ottawa, ON, Canada. IRCM
  32. Marlene Oeffinger. Analyzing RNP complex specialization using crosslinking mass spectrometry approaches and RNomics. The Physical Basis of Cellular Memory and Adaptation. Holetown, Barbados. IRCM
  33. Bensidoun P. Investigating the function of specialized nucleolar pores. ASCB: 1st MAPS meeting. Montreal, QC, Canada. IRCM
  34. Marlene Oeffinger. Investigating dynamic interactomes and variances along gene expression pathways using proteomic approaches. 10th CNPN Meeting. Vancouver, BC, Canada, IRCM
  35. Scott DD. Nol12 is a novel RBP at the nexus of RNA and DNA metabolism. 10th CNPN Meeting Vancouver, BC, Canada, IRCM
  36. Trahan C. Determining differential translatomes and composition of 5.8S S and L ribosome variants in S. cerevisiae. Ribosome Synthesis 2015. Orford, QC, Canada. IRCM
  37. Trahan C. Determining differential translatomes and composition of 5.8S S and L ribosome variants in S. cerevisiae. Montreal RNA Day 2018. Montreal, QC, Canada. IRCM
  38. Rodrigo Reyes. DNA and Proteins as single-molecules in vivo and in vitro. Phusion Conference. Cancun, Mexico [Lightsheet 2]
  39. Rodrigo Reyes. The Physical Basis of Cellular Memory and Adaptation. Holetown, Barbados. [Lightsheet 2]
  40. Rodrigo Reyes. Watching the replisome assemble, work and disassemble on a ColE1-type plasmid. Meeting of the International Society of Plasmid Biology. Seattle, USA. [Lightsheet 2]
  41. Rodrigo Reyes. Replisome Dynamics in Live Bacteria and Budding Yeast. Conference. Egmond aan Zee, The Netherlands. [Lightsheet 2]
  42. Rodrigo Reyes. Replisome Dynamics in Bacteria. 84th Harden Conference: Single-molecule bacteriology. Oxford, UK. [Lightsheet 2]
  43. Joaquin Ortega. Using cryo-EM to reveal the intricacies of ribosomal assembly in bacteria. Biophysical Society of Canada Annual Meeting. Vancouver, BC. Canada. MST
  44. Joaquin Ortega. Using cryo-EM to reveal the role of Era in the assembly of the 30S subunit. 11th International Conference on Ribosome Synthesis. Orford, QC. Canada. MST
  45. Joaquin Ortega. Using cryo-EM to reveal the intricacies of ribosomal assembly in bacteria. Biophysical Society of Canada Annual Meeting. Vancouver, BC. Canada. MST
  46. Joaquin Ortega. The experiment that unlocked my future. Symposium in honor of Martin Kessel National Institutes of Health. Bethesda, MD. USA. MST
  47. Susanne Bechstedt. The spindle protein CKAP2 is a potent microtubule growth factor. The Physical Basis of Cellular Memory and Adaptation. Holetown, Barbados. [TIRF_GB1 and 2]
  48. Susanne Bechstedt. The spindle protein CKAP2 is a potent microtubule growth factor. EMBO Microtubule meeting: From Atoms to Complex Systems. Heidelberg, Germany. [TIRF_GB1 and 2]
  49. Gary Brouhard. The Evolutionary Basis of Microtubule Quaternary Structure. Gordon Research Conference on Cytoskeletal Motors. West Dover, VT. [TIRF_GB1 and 2]
  50. Gary Brouhard. The Relationship between Microtubule Birth & Death. European Molecular Biology Organization Symposium; Microtubule: Structure, Regulation, and Functions. Heidelberg, Germany. [TIRF_GB1 and 2]
  51. Gary Brouhard. The Cell Biology & Biochemistry of Microtubule Nucleation. ComBio Australia. Sydney, Australia. [TIRF_GB1 and 2]
     

2017

  1. Nitin Kapdia, Angela You, Thomas Beattie & Rodrigo Reyes-Lamothe. Dynamics and stoichiometry of replisomes in live cells. Gordon Research Conference, Chromosome Dynamics. Barga, Tuscany, Italy. [Lightsheet 2]
  2. Nicolas Soubry & Rodrigo Reyes-Lamothe. Replisome under attack: the effects of UV on the composition of the replication machinery. Research Conference, Chromosome Dynamics. Barga, Tuscany, Italy. [Lightsheet 2]
  3. Thomas R. Beattie, Nitin Kapadia, Emilien Nicolas, Stephan Uphoff, Adam J.M. Wollman, Mark C. Leake and Rodrigo Reyes-Lamothe. DnaB Helicase stabilizes the bacterial replisome during frequent exchange of PolIII holoenzyme. Gordon Research Conference, Chromosome Dynamics. Barga, Tuscany, Italy. [Lightsheet 2]
  4. Bernier, F. Tahara, R. and Gendron, M. Characterization of Porosity in Titanium Powders Using X-Ray Tomography. AMPM 2017 Conference. Las Vegas, USA. [Xradia]
  5. Bensidoun P, Zenklusen D and Oeffinger M. Investigating the function of specialized nucleolar pores. 18th RiboClub Meeting Orford, Canada. IRCM
  6. Scott DD, Trahan C, Zindy PJ, Delubac M, Aguilar LC, Adivarahan S, Wei KE, Zenklusen D and Oeffinger M. Nol12 is a multifunctional RNA binding protein at the nexus of RNA and DNA metabolism. 18th RiboClub Meeting. Orford, Canada. IRCM
  7. Handyside, Ellen, M. Tapscott, Guy Narbonne, Rui Tahara, Hans C.E. Larsson, and T. Alexander Dececchi. Trapped in Time: Investigating the Morphology and Paleoecology of a Previously Unreported Lizard Specimen in Amber. Canadian Society of Vertebrate Palaeontology 5th Annual Meeting. Dinosaur Provincial Park, Alberta, Canada. [Xradia]
  8. Tanke, Darren H., Bruce M. Rothschild, Ben Borkovic, Caleb M. Brown, Philip J. Currie, Hans C.E. Larsson, Ramon S. Nagesan, and Mateusz Wosik. Ceratopsian Dinosaur Survives a Broken Neck. Canadian Society of Vertebrate Palaeontology 5th Annual Meeting. Dinosaur Provincial Park, Alberta, Canada. [Xradia]
  9. Larsson, Hans C.E., and Edward McCrady. A New Alligatorid from the Margaret Formation (Eocene), Ellesmere Island, Nunavut. Canadian Society of Vertebrate Palaeontology 5th Annual Meeting. Dinosaur Provincial Park, Alberta, Canada. [Xradia]
  10. Handyside, Ellen, M. Tapscott, Guy Narbonne, Hans C.E. Larsson, Rui Tahara, and T. Alexander Dececchi. Amber and Ambiguity: A Lizard’s Tale. Society of Vertebrate Paleontology 77th Annual Meeting. Calgary, Canada. [Xradia]
  11. Larsson, Hans C.E., Yacine Kherdjemil, and Marie Kmita. Use of Experimental Atavisms to Estimate Soft Tissue Reconstructions of the Earliest Tetrapod Limbs. Pan-American Society for Evolutionary Developmental Biology 2nd Biennial Meeting. Calgary, Canada. [Xradia]
  12. Larsson, Hans C.E., Yacine Kherdjemil, and Marie Kmita. Use of Experimental Atavisms to Estimate Soft Tissue Reconstructions of the Earliest Tetrapod Limbs. Society of Vertebrate Paleontology 77th Annual Meeting. Calgary, Canada. [Xradia]
  13. Rodrigo Reyes. Principles of Gene Circuit Design. Banff International Research Station for Mathematical Innovation and Discovery and Casa Matemática. Oaxaca, Mexico. [Lightsheet 2]
  14. Joaquin Ortega. Capturing atomic resolution snapshots of the ribosome assembly process using direct electron detectors. Microscopical Society of Canada Annual Meeting. Montreal, Quebec. Canada. MST
  15. Joaquin Ortega. Current impact of the electron microscope in human health and disease. Innovation Day. Apotex Pharmachem Inc. and James Hillier Foundation. Brantford, Ontario. MST
  16. Joaquin Ortega. The cryo-EM structure of YjeQ bound to the 30Ssubunit suggests a fidelity checkpoint function for this protein in ribosome assembly. Microscopy Society of America Meeting. St. Louis, Missouri. USA. MST
  17. Joaquin Ortega. I want to be cool too! I will do cryo-EM at FEMR. GRASP meeting. Montreal, QC. Canada. MST
  18. Yang Shao. A domesticated transposable element is essential for salinity defense in Arabidopsis thaliana. CSPB/SCBV ERM. Montreal, QC. Canada. [Phytotron]
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